FbcToCobraConverter.cpp File Reference

Implementation of a fbc 2 cobra converter. More...

Include dependency graph for FbcToCobraConverter.cpp:

Functions
void	createKineticLawForReaction (Reaction *reaction)
const GeneAssociation *	getGeneAssociationForReaction (const FbcModelPlugin *plugin, const std::string &id)
string	getNotesForFormula (const string &formula)
void	setObjectiveCoefficient (FbcModelPlugin *plugin, Model *model)
void	updateKineticLawFromBound (Reaction *reaction, FluxBound *current)

Detailed Description

Implementation of a fbc 2 cobra converter.

Author

Frank T. Bergmann

Function Documentation

createKineticLawForReaction()

void createKineticLawForReaction

(

Reaction *

reaction

)

getGeneAssociationForReaction()

const GeneAssociation * getGeneAssociationForReaction	(	const FbcModelPlugin *	plugin,
		const std::string &	id )

getNotesForFormula()

string getNotesForFormula

(

const string &

formula

)

setObjectiveCoefficient()

void setObjectiveCoefficient	(	FbcModelPlugin *	plugin,
		Model *	model )

updateKineticLawFromBound()

void updateKineticLawFromBound	(	Reaction *	reaction,
		FluxBound *	current )